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Cluster: HRGMv2_2210_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_1 HRGMv2_2210_1_660 771283 772149 - 3.A.1.132.1
TC HRGMv2_2210_1 HRGMv2_2210_1_661 772133 773125 - 3.A.1.132.1
CAZyme HRGMv2_2210_1 HRGMv2_2210_1_662 773468 775402 - CBM66 | GH32
TC HRGMv2_2210_1 HRGMv2_2210_1_663 775436 776254 - 3.A.1.1.39
TC HRGMv2_2210_1 HRGMv2_2210_1_664 776267 777151 - 3.A.1.1.36
STP HRGMv2_2210_1 HRGMv2_2210_1_665 777239 778540 - SBP_bac_1
TC HRGMv2_2210_1 HRGMv2_2210_1_666 778758 780587 + 8.A.59.2.1
TF HRGMv2_2210_1 HRGMv2_2210_1_667 780580 782211 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2210_1 HRGMv2_2210_1_668 782246 783913 - GH13_31
Gene ID: HRGMv2_2210_1_660
Type: TC
Location: 771283 - 772149 (-)
Gene ID: HRGMv2_2210_1_661
Type: TC
Location: 772133 - 773125 (-)
Gene ID: HRGMv2_2210_1_662
Type: CAZyme
Location: 773468 - 775402 (-)
Gene ID: HRGMv2_2210_1_663
Type: TC
Location: 775436 - 776254 (-)
Gene ID: HRGMv2_2210_1_664
Type: TC
Location: 776267 - 777151 (-)
Gene ID: HRGMv2_2210_1_665
Type: STP
Location: 777239 - 778540 (-)
Gene ID: HRGMv2_2210_1_666
Type: TC
Location: 778758 - 780587 (+)
Gene ID: HRGMv2_2210_1_667
Type: TF
Location: 780580 - 782211 (+)
Gene ID: HRGMv2_2210_1_668
Type: CAZyme
Location: 782246 - 783913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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