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Cluster: HRGMv2_2204_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2204_7 HRGMv2_2204_7_4 3923 6358 - GH2
CAZyme HRGMv2_2204_7 HRGMv2_2204_7_5 6389 9490 - GH38
pfam HRGMv2_2204_7 HRGMv2_2204_7_6 9581 11029 - DUF3502
TC HRGMv2_2204_7 HRGMv2_2204_7_7 11071 12000 - 3.A.1.1.29
TC HRGMv2_2204_7 HRGMv2_2204_7_8 12012 12980 - 3.A.1.1.9
Gene ID: HRGMv2_2204_7_4
Type: CAZyme
Location: 3923 - 6358 (-)
Gene ID: HRGMv2_2204_7_5
Type: CAZyme
Location: 6389 - 9490 (-)
Gene ID: HRGMv2_2204_7_6
Type: pfam
Location: 9581 - 11029 (-)
Gene ID: HRGMv2_2204_7_7
Type: TC
Location: 11071 - 12000 (-)
Gene ID: HRGMv2_2204_7_8
Type: TC
Location: 12012 - 12980 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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