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Cluster: HRGMv2_2204_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2204_55 HRGMv2_2204_55_11 8719 10974 + GH3
TC HRGMv2_2204_55 HRGMv2_2204_55_12 11398 12411 + 3.A.1.34.1
TC HRGMv2_2204_55 HRGMv2_2204_55_13 12432 13337 + 3.A.1.34.1
TC HRGMv2_2204_55 HRGMv2_2204_55_14 13342 14115 + 3.A.1.34.1
Gene ID: HRGMv2_2204_55_11
Type: CAZyme
Location: 8719 - 10974 (+)
Gene ID: HRGMv2_2204_55_12
Type: TC
Location: 11398 - 12411 (+)
Gene ID: HRGMv2_2204_55_13
Type: TC
Location: 12432 - 13337 (+)
Gene ID: HRGMv2_2204_55_14
Type: TC
Location: 13342 - 14115 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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