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Cluster: HRGMv2_2204_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2204_54 HRGMv2_2204_54_37 47122 48060 + GT2
pfam HRGMv2_2204_54 HRGMv2_2204_54_38 48054 48485 + GtrA_DPMS_TM
CAZyme HRGMv2_2204_54 HRGMv2_2204_54_39 48519 49472 + GT2
NULL(UNKNOWN) HRGMv2_2204_54 HRGMv2_2204_54_40 49472 49573 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2204_54 HRGMv2_2204_54_41 49557 52085 + 9.B.144.1.5
Gene ID: HRGMv2_2204_54_37
Type: CAZyme
Location: 47122 - 48060 (+)
Gene ID: HRGMv2_2204_54_38
Type: pfam
Location: 48054 - 48485 (+)
Gene ID: HRGMv2_2204_54_39
Type: CAZyme
Location: 48519 - 49472 (+)
Gene ID: HRGMv2_2204_54_40
Type:
Location: 49472 - 49573 (+)
Gene ID: HRGMv2_2204_54_41
Type: TC
Location: 49557 - 52085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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