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Cluster: HRGMv2_2204_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2204_5 HRGMv2_2204_5_30 34810 35496 + 3.A.1.140.1
pfam HRGMv2_2204_5 HRGMv2_2204_5_31 35486 36403 + FtsX | FtsX_ECD
TC HRGMv2_2204_5 HRGMv2_2204_5_32 36511 37707 + 9.B.174.1.2
pfam HRGMv2_2204_5 HRGMv2_2204_5_33 37782 38417 + Hexapep | Mac | Hexapep_2
TC HRGMv2_2204_5 HRGMv2_2204_5_34 38405 38986 + 4.F.1.1.7
TC HRGMv2_2204_5 HRGMv2_2204_5_35 38988 39611 + 9.B.31.1.1
CAZyme HRGMv2_2204_5 HRGMv2_2204_5_36 39615 40817 + GT28
Gene ID: HRGMv2_2204_5_30
Type: TC
Location: 34810 - 35496 (+)
Gene ID: HRGMv2_2204_5_31
Type: pfam
Location: 35486 - 36403 (+)
Gene ID: HRGMv2_2204_5_32
Type: TC
Location: 36511 - 37707 (+)
Gene ID: HRGMv2_2204_5_33
Type: pfam
Location: 37782 - 38417 (+)
Gene ID: HRGMv2_2204_5_34
Type: TC
Location: 38405 - 38986 (+)
Gene ID: HRGMv2_2204_5_35
Type: TC
Location: 38988 - 39611 (+)
Gene ID: HRGMv2_2204_5_36
Type: CAZyme
Location: 39615 - 40817 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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