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Cluster: HRGMv2_2204_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2204_48 HRGMv2_2204_48_6 6032 6799 + 3.A.1.134.12
TC HRGMv2_2204_48 HRGMv2_2204_48_7 6789 8810 + 3.A.1.134.12
TF HRGMv2_2204_48 HRGMv2_2204_48_8 8820 9671 + HTH_AraC
CAZyme HRGMv2_2204_48 HRGMv2_2204_48_9 9745 11391 + CBM91 | GH43_11
TF HRGMv2_2204_48 HRGMv2_2204_48_10 11388 12617 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2204_48 HRGMv2_2204_48_11 12769 13938 + GH5_44
TC HRGMv2_2204_48 HRGMv2_2204_48_12 13960 15342 + 2.A.2.3.3
CAZyme HRGMv2_2204_48 HRGMv2_2204_48_13 15366 17363 + GH42
Gene ID: HRGMv2_2204_48_6
Type: TC
Location: 6032 - 6799 (+)
Gene ID: HRGMv2_2204_48_7
Type: TC
Location: 6789 - 8810 (+)
Gene ID: HRGMv2_2204_48_8
Type: TF
Location: 8820 - 9671 (+)
Gene ID: HRGMv2_2204_48_9
Type: CAZyme
Location: 9745 - 11391 (+)
Gene ID: HRGMv2_2204_48_10
Type: TF
Location: 11388 - 12617 (-)
Gene ID: HRGMv2_2204_48_11
Type: CAZyme
Location: 12769 - 13938 (+)
Gene ID: HRGMv2_2204_48_12
Type: TC
Location: 13960 - 15342 (+)
Gene ID: HRGMv2_2204_48_13
Type: CAZyme
Location: 15366 - 17363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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