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Cluster: HRGMv2_2204_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2204_42 HRGMv2_2204_42_33 34713 36383 + 3.A.1.1.29
TC HRGMv2_2204_42 HRGMv2_2204_42_34 36457 37416 + 3.A.1.1.29
TC HRGMv2_2204_42 HRGMv2_2204_42_35 37438 38319 + 3.A.1.1.29
CAZyme HRGMv2_2204_42 HRGMv2_2204_42_36 38323 39846 + CBM91 | GH43_10
CAZyme HRGMv2_2204_42 HRGMv2_2204_42_37 39881 41026 + GH8
CAZyme HRGMv2_2204_42 HRGMv2_2204_42_38 41038 42750 + CE17
CAZyme HRGMv2_2204_42 HRGMv2_2204_42_39 42775 44325 + CBM91 | GH43_12
Gene ID: HRGMv2_2204_42_33
Type: TC
Location: 34713 - 36383 (+)
Gene ID: HRGMv2_2204_42_34
Type: TC
Location: 36457 - 37416 (+)
Gene ID: HRGMv2_2204_42_35
Type: TC
Location: 37438 - 38319 (+)
Gene ID: HRGMv2_2204_42_36
Type: CAZyme
Location: 38323 - 39846 (+)
Gene ID: HRGMv2_2204_42_37
Type: CAZyme
Location: 39881 - 41026 (+)
Gene ID: HRGMv2_2204_42_38
Type: CAZyme
Location: 41038 - 42750 (+)
Gene ID: HRGMv2_2204_42_39
Type: CAZyme
Location: 42775 - 44325 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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