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Cluster: HRGMv2_2204_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2204_38 HRGMv2_2204_38_6 3604 5103 - GH51_1
CAZyme HRGMv2_2204_38 HRGMv2_2204_38_7 5120 6583 - GH43_4
TF HRGMv2_2204_38 HRGMv2_2204_38_8 6669 7589 - HTH_5
CAZyme HRGMv2_2204_38 HRGMv2_2204_38_9 7635 8990 - GH43_4
TC HRGMv2_2204_38 HRGMv2_2204_38_10 9002 9871 - 3.A.1.1.11
TC HRGMv2_2204_38 HRGMv2_2204_38_11 9886 10812 - 3.A.1.1.34
STP HRGMv2_2204_38 HRGMv2_2204_38_12 10902 12293 - SBP_bac_1
CAZyme HRGMv2_2204_38 HRGMv2_2204_38_13 12501 13475 - GH43_26
TC HRGMv2_2204_38 HRGMv2_2204_38_14 13714 14367 + 9.B.28.1.2
Gene ID: HRGMv2_2204_38_6
Type: CAZyme
Location: 3604 - 5103 (-)
Gene ID: HRGMv2_2204_38_7
Type: CAZyme
Location: 5120 - 6583 (-)
Gene ID: HRGMv2_2204_38_8
Type: TF
Location: 6669 - 7589 (-)
Gene ID: HRGMv2_2204_38_9
Type: CAZyme
Location: 7635 - 8990 (-)
Gene ID: HRGMv2_2204_38_10
Type: TC
Location: 9002 - 9871 (-)
Gene ID: HRGMv2_2204_38_11
Type: TC
Location: 9886 - 10812 (-)
Gene ID: HRGMv2_2204_38_12
Type: STP
Location: 10902 - 12293 (-)
Gene ID: HRGMv2_2204_38_13
Type: CAZyme
Location: 12501 - 13475 (-)
Gene ID: HRGMv2_2204_38_14
Type: TC
Location: 13714 - 14367 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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