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Cluster: HRGMv2_2204_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2204_37 HRGMv2_2204_37_45 50725 52119 + 2.A.66.1.28
TC HRGMv2_2204_37 HRGMv2_2204_37_46 52340 53488 + 3.A.1.1.22
TC HRGMv2_2204_37 HRGMv2_2204_37_47 53485 54357 + 3.A.1.1.3
TC HRGMv2_2204_37 HRGMv2_2204_37_48 54354 55280 + 3.A.1.1.34
TC HRGMv2_2204_37 HRGMv2_2204_37_49 55304 56710 + 3.A.1.1.3
sulfatase HRGMv2_2204_37 HRGMv2_2204_37_50 56703 57467 + S1_19
pfam HRGMv2_2204_37 HRGMv2_2204_37_51 57511 58215 - Zn_peptidase_2
CAZyme HRGMv2_2204_37 HRGMv2_2204_37_52 58464 59942 + GH77
TF HRGMv2_2204_37 HRGMv2_2204_37_53 59968 61038 + LacI
CAZyme HRGMv2_2204_37 HRGMv2_2204_37_54 61058 63322 + GT35
Gene ID: HRGMv2_2204_37_45
Type: TC
Location: 50725 - 52119 (+)
Gene ID: HRGMv2_2204_37_46
Type: TC
Location: 52340 - 53488 (+)
Gene ID: HRGMv2_2204_37_47
Type: TC
Location: 53485 - 54357 (+)
Gene ID: HRGMv2_2204_37_48
Type: TC
Location: 54354 - 55280 (+)
Gene ID: HRGMv2_2204_37_49
Type: TC
Location: 55304 - 56710 (+)
Gene ID: HRGMv2_2204_37_50
Type: sulfatase
Location: 56703 - 57467 (+)
Gene ID: HRGMv2_2204_37_51
Type: pfam
Location: 57511 - 58215 (-)
Gene ID: HRGMv2_2204_37_52
Type: CAZyme
Location: 58464 - 59942 (+)
Gene ID: HRGMv2_2204_37_53
Type: TF
Location: 59968 - 61038 (+)
Gene ID: HRGMv2_2204_37_54
Type: CAZyme
Location: 61058 - 63322 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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