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Cluster: HRGMv2_2204_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2204_15 HRGMv2_2204_15_58 64129 66870 + GH3
STP HRGMv2_2204_15 HRGMv2_2204_15_59 66910 67512 - TetR_N
pfam HRGMv2_2204_15 HRGMv2_2204_15_60 67754 69823 + ACR_tran | MMPL | MMPL
TC HRGMv2_2204_15 HRGMv2_2204_15_61 69836 72472 + 9.B.74.1.4
STP HRGMv2_2204_15 HRGMv2_2204_15_62 72581 72958 + Fer4 | Fer4
pfam HRGMv2_2204_15 HRGMv2_2204_15_63 73007 73816 - BPD_transp_1
TC HRGMv2_2204_15 HRGMv2_2204_15_64 73791 74579 - 3.A.1.17.8
Gene ID: HRGMv2_2204_15_58
Type: CAZyme
Location: 64129 - 66870 (+)
Gene ID: HRGMv2_2204_15_59
Type: STP
Location: 66910 - 67512 (-)
Gene ID: HRGMv2_2204_15_60
Type: pfam
Location: 67754 - 69823 (+)
Gene ID: HRGMv2_2204_15_61
Type: TC
Location: 69836 - 72472 (+)
Gene ID: HRGMv2_2204_15_62
Type: STP
Location: 72581 - 72958 (+)
Gene ID: HRGMv2_2204_15_63
Type: pfam
Location: 73007 - 73816 (-)
Gene ID: HRGMv2_2204_15_64
Type: TC
Location: 73791 - 74579 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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