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Cluster: HRGMv2_2191_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2191_10 HRGMv2_2191_10_38 43260 45299 + GH31_4
CAZyme HRGMv2_2191_10 HRGMv2_2191_10_39 45484 46965 + GH77
TF HRGMv2_2191_10 HRGMv2_2191_10_40 46984 48012 + LacI
CAZyme HRGMv2_2191_10 HRGMv2_2191_10_41 48101 50383 + GT35
NULL(UNKNOWN) HRGMv2_2191_10 HRGMv2_2191_10_42 50520 50792 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2191_10 HRGMv2_2191_10_43 50768 52498 + 3.A.1.135.7
TC HRGMv2_2191_10 HRGMv2_2191_10_44 52495 54255 + 3.A.1.135.5
TC HRGMv2_2191_10 HRGMv2_2191_10_45 54367 55692 - 2.A.66.1.37
TC HRGMv2_2191_10 HRGMv2_2191_10_46 55913 57274 + 2.A.66.1.33
Gene ID: HRGMv2_2191_10_38
Type: CAZyme
Location: 43260 - 45299 (+)
Gene ID: HRGMv2_2191_10_39
Type: CAZyme
Location: 45484 - 46965 (+)
Gene ID: HRGMv2_2191_10_40
Type: TF
Location: 46984 - 48012 (+)
Gene ID: HRGMv2_2191_10_41
Type: CAZyme
Location: 48101 - 50383 (+)
Gene ID: HRGMv2_2191_10_42
Type:
Location: 50520 - 50792 (+)
Gene ID: HRGMv2_2191_10_43
Type: TC
Location: 50768 - 52498 (+)
Gene ID: HRGMv2_2191_10_44
Type: TC
Location: 52495 - 54255 (+)
Gene ID: HRGMv2_2191_10_45
Type: TC
Location: 54367 - 55692 (-)
Gene ID: HRGMv2_2191_10_46
Type: TC
Location: 55913 - 57274 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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