Cluster: HRGMv2_2191_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2191
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2191_48 | HRGMv2_2191_48_2 | 1000 | 1473 | + | 3.A.7.19.1 |
| pfam | HRGMv2_2191_48 | HRGMv2_2191_48_3 | 1497 | 1745 | + | Ribosomal_S18 |
| TF | HRGMv2_2191_48 | HRGMv2_2191_48_4 | 1856 | 2863 | + | LacI |
| TC | HRGMv2_2191_48 | HRGMv2_2191_48_5 | 3086 | 4024 | + | 3.A.1.1.29 |
| TC | HRGMv2_2191_48 | HRGMv2_2191_48_6 | 4038 | 4949 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_2191_48 | HRGMv2_2191_48_7 | 4964 | 6574 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2191_48 | HRGMv2_2191_48_8 | 6595 | 7911 | + | GH30_1 |
Gene ID: HRGMv2_2191_48_2
Type: TC
Location: 1000 - 1473 (+)
Type: TC
Location: 1000 - 1473 (+)
Gene ID: HRGMv2_2191_48_3
Type: pfam
Location: 1497 - 1745 (+)
Type: pfam
Location: 1497 - 1745 (+)
Gene ID: HRGMv2_2191_48_4
Type: TF
Location: 1856 - 2863 (+)
Type: TF
Location: 1856 - 2863 (+)
Gene ID: HRGMv2_2191_48_5
Type: TC
Location: 3086 - 4024 (+)
Type: TC
Location: 3086 - 4024 (+)
Gene ID: HRGMv2_2191_48_6
Type: TC
Location: 4038 - 4949 (+)
Type: TC
Location: 4038 - 4949 (+)
Gene ID: HRGMv2_2191_48_7
Type:
Location: 4964 - 6574 (+)
Type:
Location: 4964 - 6574 (+)
Gene ID: HRGMv2_2191_48_8
Type: CAZyme
Location: 6595 - 7911 (+)
Type: CAZyme
Location: 6595 - 7911 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900543115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2191_48_3 | vegan > omnivore | 1.75209 | 0.00782 |