dbCAN Logo

Cluster: HRGMv2_2191_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2191_40 HRGMv2_2191_40_4 2658 5114 - 3.A.9.1.2
TF HRGMv2_2191_40 HRGMv2_2191_40_5 5129 5509 - GntR
CAZyme HRGMv2_2191_40 HRGMv2_2191_40_6 5708 8323 - GH2
NULL(UNKNOWN) HRGMv2_2191_40 HRGMv2_2191_40_7 8437 8793 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2191_40 HRGMv2_2191_40_8 8796 9779 - 3.A.1.5.19
TC HRGMv2_2191_40 HRGMv2_2191_40_9 9781 10806 - 3.A.1.5.19
TC HRGMv2_2191_40 HRGMv2_2191_40_10 10844 11761 - 3.A.1.5.2
TC HRGMv2_2191_40 HRGMv2_2191_40_11 11775 12731 - 3.A.1.5.19
TC HRGMv2_2191_40 HRGMv2_2191_40_12 12856 14601 - 3.A.1.5.2
Gene ID: HRGMv2_2191_40_4
Type: TC
Location: 2658 - 5114 (-)
Gene ID: HRGMv2_2191_40_5
Type: TF
Location: 5129 - 5509 (-)
Gene ID: HRGMv2_2191_40_6
Type: CAZyme
Location: 5708 - 8323 (-)
Gene ID: HRGMv2_2191_40_7
Type:
Location: 8437 - 8793 (-)
Gene ID: HRGMv2_2191_40_8
Type: TC
Location: 8796 - 9779 (-)
Gene ID: HRGMv2_2191_40_9
Type: TC
Location: 9781 - 10806 (-)
Gene ID: HRGMv2_2191_40_10
Type: TC
Location: 10844 - 11761 (-)
Gene ID: HRGMv2_2191_40_11
Type: TC
Location: 11775 - 12731 (-)
Gene ID: HRGMv2_2191_40_12
Type: TC
Location: 12856 - 14601 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List