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Cluster: HRGMv2_2191_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2191_38 HRGMv2_2191_38_6 6570 8072 + GH51_1
TC HRGMv2_2191_38 HRGMv2_2191_38_7 8252 8869 - 3.A.2.3.2
TC HRGMv2_2191_38 HRGMv2_2191_38_8 8905 10329 - 3.A.2.3.3
TC HRGMv2_2191_38 HRGMv2_2191_38_9 10345 12111 - 3.A.2.3.2
Gene ID: HRGMv2_2191_38_6
Type: CAZyme
Location: 6570 - 8072 (+)
Gene ID: HRGMv2_2191_38_7
Type: TC
Location: 8252 - 8869 (-)
Gene ID: HRGMv2_2191_38_8
Type: TC
Location: 8905 - 10329 (-)
Gene ID: HRGMv2_2191_38_9
Type: TC
Location: 10345 - 12111 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2191_38_6 vegetarian > omnivore 1.14154 0.01882

🧭 Explore Read Mapping of CGC

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