dbCAN Logo

Cluster: HRGMv2_2191_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2191_35 HRGMv2_2191_35_5 5327 7147 + 9.B.33.1.1
TF HRGMv2_2191_35 HRGMv2_2191_35_6 7179 8765 + HTH_AraC
TC HRGMv2_2191_35 HRGMv2_2191_35_7 8874 10571 + 3.A.1.1.29
TC HRGMv2_2191_35 HRGMv2_2191_35_8 10657 11592 + 3.A.1.1.29
TC HRGMv2_2191_35 HRGMv2_2191_35_9 11606 12544 + 3.A.1.1.29
CAZyme HRGMv2_2191_35 HRGMv2_2191_35_10 12560 15727 + CBM22 | CBM22 | CBM9 | GH10
CAZyme HRGMv2_2191_35 HRGMv2_2191_35_11 15895 17052 + GH8
CAZyme HRGMv2_2191_35 HRGMv2_2191_35_12 17140 18699 + CBM91 | GH43_12
Gene ID: HRGMv2_2191_35_5
Type: TC
Location: 5327 - 7147 (+)
Gene ID: HRGMv2_2191_35_6
Type: TF
Location: 7179 - 8765 (+)
Gene ID: HRGMv2_2191_35_7
Type: TC
Location: 8874 - 10571 (+)
Gene ID: HRGMv2_2191_35_8
Type: TC
Location: 10657 - 11592 (+)
Gene ID: HRGMv2_2191_35_9
Type: TC
Location: 11606 - 12544 (+)
Gene ID: HRGMv2_2191_35_10
Type: CAZyme
Location: 12560 - 15727 (+)
Gene ID: HRGMv2_2191_35_11
Type: CAZyme
Location: 15895 - 17052 (+)
Gene ID: HRGMv2_2191_35_12
Type: CAZyme
Location: 17140 - 18699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List