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Cluster: HRGMv2_2191_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2191_34 HRGMv2_2191_34_16 16432 16929 - 3.A.1.1.4
TC HRGMv2_2191_34 HRGMv2_2191_34_17 16926 17810 - 3.A.1.1.4
STP HRGMv2_2191_34 HRGMv2_2191_34_18 17921 19081 - SBP_bac_1
TF HRGMv2_2191_34 HRGMv2_2191_34_19 19039 19779 - HTH_AraC
TC HRGMv2_2191_34 HRGMv2_2191_34_20 19858 22494 - 3.A.3.2.28
pfam HRGMv2_2191_34 HRGMv2_2191_34_21 22570 23109 - YgbB
pfam HRGMv2_2191_34 HRGMv2_2191_34_22 23257 24531 - Fe-ADH_2
CAZyme HRGMv2_2191_34 HRGMv2_2191_34_23 24562 25578 - GT2
Gene ID: HRGMv2_2191_34_16
Type: TC
Location: 16432 - 16929 (-)
Gene ID: HRGMv2_2191_34_17
Type: TC
Location: 16926 - 17810 (-)
Gene ID: HRGMv2_2191_34_18
Type: STP
Location: 17921 - 19081 (-)
Gene ID: HRGMv2_2191_34_19
Type: TF
Location: 19039 - 19779 (-)
Gene ID: HRGMv2_2191_34_20
Type: TC
Location: 19858 - 22494 (-)
Gene ID: HRGMv2_2191_34_21
Type: pfam
Location: 22570 - 23109 (-)
Gene ID: HRGMv2_2191_34_22
Type: pfam
Location: 23257 - 24531 (-)
Gene ID: HRGMv2_2191_34_23
Type: CAZyme
Location: 24562 - 25578 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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