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Cluster: HRGMv2_2191_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2191_18 HRGMv2_2191_18_31 35773 37131 + 2.A.38.1.1
TC HRGMv2_2191_18 HRGMv2_2191_18_32 37266 38711 + 2.A.38.1.1
STP HRGMv2_2191_18 HRGMv2_2191_18_33 38726 39835 + Aminotran_1_2
TC HRGMv2_2191_18 HRGMv2_2191_18_34 39987 41363 + 2.A.66.1.33
CAZyme HRGMv2_2191_18 HRGMv2_2191_18_35 41452 43494 + GH42
pfam HRGMv2_2191_18 HRGMv2_2191_18_36 43662 44627 + 2-Hacid_dh_C | NAD_binding_2
pfam HRGMv2_2191_18 HRGMv2_2191_18_37 44685 45476 + S6PP | Hydrolase_3
CAZyme HRGMv2_2191_18 HRGMv2_2191_18_38 45788 46519 + CE4
Gene ID: HRGMv2_2191_18_31
Type: TC
Location: 35773 - 37131 (+)
Gene ID: HRGMv2_2191_18_32
Type: TC
Location: 37266 - 38711 (+)
Gene ID: HRGMv2_2191_18_33
Type: STP
Location: 38726 - 39835 (+)
Gene ID: HRGMv2_2191_18_34
Type: TC
Location: 39987 - 41363 (+)
Gene ID: HRGMv2_2191_18_35
Type: CAZyme
Location: 41452 - 43494 (+)
Gene ID: HRGMv2_2191_18_36
Type: pfam
Location: 43662 - 44627 (+)
Gene ID: HRGMv2_2191_18_37
Type: pfam
Location: 44685 - 45476 (+)
Gene ID: HRGMv2_2191_18_38
Type: CAZyme
Location: 45788 - 46519 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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