dbCAN Logo

Cluster: HRGMv2_2191_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2191_11 HRGMv2_2191_11_53 63584 64555 + 3.A.1.1.29
TC HRGMv2_2191_11 HRGMv2_2191_11_54 64567 65460 + 3.A.1.1.10
pfam HRGMv2_2191_11 HRGMv2_2191_11_55 65518 67281 + SBP_bac_1
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_56 67358 69766 + GH95
NULL(UNKNOWN) HRGMv2_2191_11 HRGMv2_2191_11_57 69815 69946 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_58 69943 72177 + GH95
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_59 72161 75712 + GH146 | GH31_4
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_60 75714 78146 + GH2
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_61 78205 81327 + GH2
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_62 81387 81830 + GH29
CAZyme HRGMv2_2191_11 HRGMv2_2191_11_63 81779 82246 + GH43_34
Gene ID: HRGMv2_2191_11_53
Type: TC
Location: 63584 - 64555 (+)
Gene ID: HRGMv2_2191_11_54
Type: TC
Location: 64567 - 65460 (+)
Gene ID: HRGMv2_2191_11_55
Type: pfam
Location: 65518 - 67281 (+)
Gene ID: HRGMv2_2191_11_56
Type: CAZyme
Location: 67358 - 69766 (+)
Gene ID: HRGMv2_2191_11_57
Type:
Location: 69815 - 69946 (+)
Gene ID: HRGMv2_2191_11_58
Type: CAZyme
Location: 69943 - 72177 (+)
Gene ID: HRGMv2_2191_11_59
Type: CAZyme
Location: 72161 - 75712 (+)
Gene ID: HRGMv2_2191_11_60
Type: CAZyme
Location: 75714 - 78146 (+)
Gene ID: HRGMv2_2191_11_61
Type: CAZyme
Location: 78205 - 81327 (+)
Gene ID: HRGMv2_2191_11_62
Type: CAZyme
Location: 81387 - 81830 (+)
Gene ID: HRGMv2_2191_11_63
Type: CAZyme
Location: 81779 - 82246 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List