dbCAN Logo

Cluster: HRGMv2_2167_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_1663 1788387 1789886 + GH77
TF HRGMv2_2167_1 HRGMv2_2167_1_1664 1790245 1790457 + CSD
TC HRGMv2_2167_1 HRGMv2_2167_1_1665 1790687 1792324 + 3.A.1.121.4
TC HRGMv2_2167_1 HRGMv2_2167_1_1666 1792480 1793838 - 2.A.66.1.32
pfam HRGMv2_2167_1 HRGMv2_2167_1_1667 1793968 1794525 - DUF1003
TC HRGMv2_2167_1 HRGMv2_2167_1_1668 1794882 1795436 + 3.A.1.25.2
Gene ID: HRGMv2_2167_1_1663
Type: CAZyme
Location: 1788387 - 1789886 (+)
Gene ID: HRGMv2_2167_1_1664
Type: TF
Location: 1790245 - 1790457 (+)
Gene ID: HRGMv2_2167_1_1665
Type: TC
Location: 1790687 - 1792324 (+)
Gene ID: HRGMv2_2167_1_1666
Type: TC
Location: 1792480 - 1793838 (-)
Gene ID: HRGMv2_2167_1_1667
Type: pfam
Location: 1793968 - 1794525 (-)
Gene ID: HRGMv2_2167_1_1668
Type: TC
Location: 1794882 - 1795436 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List