Cluster: HRGMv2_2167_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1229 | 1330448 | 1331518 | + | GT28 |
| STP | HRGMv2_2167_1 | HRGMv2_2167_1_1230 | 1331509 | 1332054 | - | Sigma70_r4_2 |
| pfam | HRGMv2_2167_1 | HRGMv2_2167_1_1231 | 1332081 | 1332497 | - | HIT | DcpS_C |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1232 | 1332494 | 1333114 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_2167_1_1229
Type: CAZyme
Location: 1330448 - 1331518 (+)
Type: CAZyme
Location: 1330448 - 1331518 (+)
Gene ID: HRGMv2_2167_1_1230
Type: STP
Location: 1331509 - 1332054 (-)
Type: STP
Location: 1331509 - 1332054 (-)
Gene ID: HRGMv2_2167_1_1231
Type: pfam
Location: 1332081 - 1332497 (-)
Type: pfam
Location: 1332081 - 1332497 (-)
Gene ID: HRGMv2_2167_1_1232
Type: TC
Location: 1332494 - 1333114 (-)
Type: TC
Location: 1332494 - 1333114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.