Cluster: HRGMv2_2167_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1076 | 1162781 | 1164106 | - | GT2 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1077 | 1164820 | 1165899 | + | 2.A.56.1.2 |
| pfam | HRGMv2_2167_1 | HRGMv2_2167_1_1078 | 1166136 | 1166624 | + | DctQ |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1079 | 1166626 | 1167885 | + | 2.A.56.1.4 |
Gene ID: HRGMv2_2167_1_1076
Type: CAZyme
Location: 1162781 - 1164106 (-)
Type: CAZyme
Location: 1162781 - 1164106 (-)
Gene ID: HRGMv2_2167_1_1077
Type: TC
Location: 1164820 - 1165899 (+)
Type: TC
Location: 1164820 - 1165899 (+)
Gene ID: HRGMv2_2167_1_1078
Type: pfam
Location: 1166136 - 1166624 (+)
Type: pfam
Location: 1166136 - 1166624 (+)
Gene ID: HRGMv2_2167_1_1079
Type: TC
Location: 1166626 - 1167885 (+)
Type: TC
Location: 1166626 - 1167885 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.