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Cluster: HRGMv2_2167_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2167_1 HRGMv2_2167_1_737 794661 795449 - 3.A.1.7.5
TC HRGMv2_2167_1 HRGMv2_2167_1_738 795518 796396 - 3.A.1.7.5
TC HRGMv2_2167_1 HRGMv2_2167_1_739 796400 797383 - 3.A.1.7.5
pfam HRGMv2_2167_1 HRGMv2_2167_1_740 797546 798499 - PBP_like | PBP_like_2 | SBP_bac_11
pfam HRGMv2_2167_1 HRGMv2_2167_1_741 798892 800661 - LytR_cpsA_psr
TC HRGMv2_2167_1 HRGMv2_2167_1_742 800678 802177 - 9.B.18.1.1
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_743 802426 803412 - GT2
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_744 803409 805607 - GT2 | GT2
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_745 805604 806566 - GT2
Gene ID: HRGMv2_2167_1_737
Type: TC
Location: 794661 - 795449 (-)
Gene ID: HRGMv2_2167_1_738
Type: TC
Location: 795518 - 796396 (-)
Gene ID: HRGMv2_2167_1_739
Type: TC
Location: 796400 - 797383 (-)
Gene ID: HRGMv2_2167_1_740
Type: pfam
Location: 797546 - 798499 (-)
Gene ID: HRGMv2_2167_1_741
Type: pfam
Location: 798892 - 800661 (-)
Gene ID: HRGMv2_2167_1_742
Type: TC
Location: 800678 - 802177 (-)
Gene ID: HRGMv2_2167_1_743
Type: CAZyme
Location: 802426 - 803412 (-)
Gene ID: HRGMv2_2167_1_744
Type: CAZyme
Location: 803409 - 805607 (-)
Gene ID: HRGMv2_2167_1_745
Type: CAZyme
Location: 805604 - 806566 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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