Cluster: HRGMv2_2167_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_3385 | 3691751 | 3694186 | - | GH73 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_3386 | 3694242 | 3695654 | - | 3.B.1.1.6 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_3387 | 3695721 | 3696869 | - | 3.B.1.1.3 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_3388 | 3696908 | 3697303 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2167_1 | HRGMv2_2167_1_3389 | 3697325 | 3698119 | - | OAD_gamma |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_3390 | 3698137 | 3699567 | - | 3.B.1.1.5 |
Gene ID: HRGMv2_2167_1_3385
Type: CAZyme
Location: 3691751 - 3694186 (-)
Type: CAZyme
Location: 3691751 - 3694186 (-)
Gene ID: HRGMv2_2167_1_3386
Type: TC
Location: 3694242 - 3695654 (-)
Type: TC
Location: 3694242 - 3695654 (-)
Gene ID: HRGMv2_2167_1_3387
Type: TC
Location: 3695721 - 3696869 (-)
Type: TC
Location: 3695721 - 3696869 (-)
Gene ID: HRGMv2_2167_1_3388
Type: TC
Location: 3696908 - 3697303 (-)
Type: TC
Location: 3696908 - 3697303 (-)
Gene ID: HRGMv2_2167_1_3389
Type: pfam
Location: 3697325 - 3698119 (-)
Type: pfam
Location: 3697325 - 3698119 (-)
Gene ID: HRGMv2_2167_1_3390
Type: TC
Location: 3698137 - 3699567 (-)
Type: TC
Location: 3698137 - 3699567 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.