Cluster: HRGMv2_2167_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1988 | 2195418 | 2196344 | + | GT2 |
| pfam | HRGMv2_2167_1 | HRGMv2_2167_1_1989 | 2196593 | 2197168 | + | dTDP_sugar_isom |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1990 | 2197379 | 2198197 | + | 3.A.1.104.2 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1991 | 2198207 | 2199523 | + | 3.A.1.103.6 |
| NULL(UNKNOWN) | HRGMv2_2167_1 | HRGMv2_2167_1_1992 | 2199539 | 2200399 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1993 | 2200396 | 2203509 | + | GT2 |
Gene ID: HRGMv2_2167_1_1988
Type: CAZyme
Location: 2195418 - 2196344 (+)
Type: CAZyme
Location: 2195418 - 2196344 (+)
Gene ID: HRGMv2_2167_1_1989
Type: pfam
Location: 2196593 - 2197168 (+)
Type: pfam
Location: 2196593 - 2197168 (+)
Gene ID: HRGMv2_2167_1_1990
Type: TC
Location: 2197379 - 2198197 (+)
Type: TC
Location: 2197379 - 2198197 (+)
Gene ID: HRGMv2_2167_1_1991
Type: TC
Location: 2198207 - 2199523 (+)
Type: TC
Location: 2198207 - 2199523 (+)
Gene ID: HRGMv2_2167_1_1992
Type:
Location: 2199539 - 2200399 (+)
Type:
Location: 2199539 - 2200399 (+)
Gene ID: HRGMv2_2167_1_1993
Type: CAZyme
Location: 2200396 - 2203509 (+)
Type: CAZyme
Location: 2200396 - 2203509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.