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Cluster: HRGMv2_2167_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2167_1 HRGMv2_2167_1_1826 1964342 1966186 + 3.A.16.1.1
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_1827 1966773 1968854 + GH13_39
pfam HRGMv2_2167_1 HRGMv2_2167_1_1828 1969503 1971275 + MTHFR | S-methyl_trans
STP HRGMv2_2167_1 HRGMv2_2167_1_1829 1971439 1972695 + Rhodanese
TC HRGMv2_2167_1 HRGMv2_2167_1_1830 1973107 1973670 + 2.A.107.1.2
pfam HRGMv2_2167_1 HRGMv2_2167_1_1831 1973869 1975653 + VanW | G5
TC HRGMv2_2167_1 HRGMv2_2167_1_1832 1976055 1977386 + 2.A.66.1.33
TC HRGMv2_2167_1 HRGMv2_2167_1_1833 1977629 1978312 - 3.A.1.6.1
Gene ID: HRGMv2_2167_1_1826
Type: TC
Location: 1964342 - 1966186 (+)
Gene ID: HRGMv2_2167_1_1827
Type: CAZyme
Location: 1966773 - 1968854 (+)
Gene ID: HRGMv2_2167_1_1828
Type: pfam
Location: 1969503 - 1971275 (+)
Gene ID: HRGMv2_2167_1_1829
Type: STP
Location: 1971439 - 1972695 (+)
Gene ID: HRGMv2_2167_1_1830
Type: TC
Location: 1973107 - 1973670 (+)
Gene ID: HRGMv2_2167_1_1831
Type: pfam
Location: 1973869 - 1975653 (+)
Gene ID: HRGMv2_2167_1_1832
Type: TC
Location: 1976055 - 1977386 (+)
Gene ID: HRGMv2_2167_1_1833
Type: TC
Location: 1977629 - 1978312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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