Cluster: HRGMv2_2167_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1748 | 1892667 | 1893584 | + | GT2 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1749 | 1893952 | 1895337 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1750 | 1895339 | 1896370 | + | GT2 |
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1751 | 1896438 | 1898270 | + | GT2 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1752 | 1898340 | 1899128 | + | 3.A.1.103.4 |
| TC | HRGMv2_2167_1 | HRGMv2_2167_1_1753 | 1899147 | 1899902 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_2167_1 | HRGMv2_2167_1_1754 | 1899924 | 1901705 | + | GT2 |
Gene ID: HRGMv2_2167_1_1748
Type: CAZyme
Location: 1892667 - 1893584 (+)
Type: CAZyme
Location: 1892667 - 1893584 (+)
Gene ID: HRGMv2_2167_1_1749
Type: TC
Location: 1893952 - 1895337 (+)
Type: TC
Location: 1893952 - 1895337 (+)
Gene ID: HRGMv2_2167_1_1750
Type: CAZyme
Location: 1895339 - 1896370 (+)
Type: CAZyme
Location: 1895339 - 1896370 (+)
Gene ID: HRGMv2_2167_1_1751
Type: CAZyme
Location: 1896438 - 1898270 (+)
Type: CAZyme
Location: 1896438 - 1898270 (+)
Gene ID: HRGMv2_2167_1_1752
Type: TC
Location: 1898340 - 1899128 (+)
Type: TC
Location: 1898340 - 1899128 (+)
Gene ID: HRGMv2_2167_1_1753
Type: TC
Location: 1899147 - 1899902 (+)
Type: TC
Location: 1899147 - 1899902 (+)
Gene ID: HRGMv2_2167_1_1754
Type: CAZyme
Location: 1899924 - 1901705 (+)
Type: CAZyme
Location: 1899924 - 1901705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.