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Cluster: HRGMv2_2167_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2167_1 HRGMv2_2167_1_1686 1811563 1812834 + 2.A.56.1.6
peptidase HRGMv2_2167_1 HRGMv2_2167_1_1687 1813192 1814508 + M20.UND
TC HRGMv2_2167_1 HRGMv2_2167_1_1688 1814511 1815686 + 3.A.1.2.17
TC HRGMv2_2167_1 HRGMv2_2167_1_1689 1815986 1817542 + 3.A.1.2.17
TC HRGMv2_2167_1 HRGMv2_2167_1_1690 1817526 1818581 + 3.A.1.2.12
TC HRGMv2_2167_1 HRGMv2_2167_1_1691 1818585 1819535 + 3.A.1.2.18
pfam HRGMv2_2167_1 HRGMv2_2167_1_1692 1819753 1820712 + A_deaminase
TF HRGMv2_2167_1 HRGMv2_2167_1_1693 1821090 1821827 + 0040266
TC HRGMv2_2167_1 HRGMv2_2167_1_1694 1821846 1822592 + 3.A.1.16.1
TC HRGMv2_2167_1 HRGMv2_2167_1_1695 1822589 1823371 + 3.A.1.17.7
pfam HRGMv2_2167_1 HRGMv2_2167_1_1696 1823442 1824233 + PNP_UDP_1
TC HRGMv2_2167_1 HRGMv2_2167_1_1697 1824391 1825488 + 3.A.1.17.11
TC HRGMv2_2167_1 HRGMv2_2167_1_1698 1825532 1826311 + 3.A.1.17.7
pfam HRGMv2_2167_1 HRGMv2_2167_1_1699 1826530 1827285 + Exo_endo_phos
TC HRGMv2_2167_1 HRGMv2_2167_1_1700 1827467 1829320 + 3.A.1.120.6
CAZyme HRGMv2_2167_1 HRGMv2_2167_1_1701 1829512 1831446 + GH13_11
TF HRGMv2_2167_1 HRGMv2_2167_1_1702 1831494 1833098 + HTH_AraC | HTH_AraC
TC HRGMv2_2167_1 HRGMv2_2167_1_1703 1833098 1833874 + 8.A.59.2.1
pfam HRGMv2_2167_1 HRGMv2_2167_1_1704 1833864 1835285 + ABC_tran
pfam HRGMv2_2167_1 HRGMv2_2167_1_1705 1835285 1836514 + Peripla_BP_4
TC HRGMv2_2167_1 HRGMv2_2167_1_1706 1836504 1837469 + 3.A.1.2.3
TC HRGMv2_2167_1 HRGMv2_2167_1_1707 1837666 1839345 + 3.A.1.5.22
TC HRGMv2_2167_1 HRGMv2_2167_1_1708 1839433 1840404 + 3.A.1.5.3
TC HRGMv2_2167_1 HRGMv2_2167_1_1709 1840406 1841269 + 3.A.1.5.15
TC HRGMv2_2167_1 HRGMv2_2167_1_1710 1841284 1842291 + 3.A.1.5.2
TC HRGMv2_2167_1 HRGMv2_2167_1_1711 1842295 1843245 + 3.A.1.5.15
Gene ID: HRGMv2_2167_1_1686
Type: TC
Location: 1811563 - 1812834 (+)
Gene ID: HRGMv2_2167_1_1687
Type: peptidase
Location: 1813192 - 1814508 (+)
Gene ID: HRGMv2_2167_1_1688
Type: TC
Location: 1814511 - 1815686 (+)
Gene ID: HRGMv2_2167_1_1689
Type: TC
Location: 1815986 - 1817542 (+)
Gene ID: HRGMv2_2167_1_1690
Type: TC
Location: 1817526 - 1818581 (+)
Gene ID: HRGMv2_2167_1_1691
Type: TC
Location: 1818585 - 1819535 (+)
Gene ID: HRGMv2_2167_1_1692
Type: pfam
Location: 1819753 - 1820712 (+)
Gene ID: HRGMv2_2167_1_1693
Type: TF
Location: 1821090 - 1821827 (+)
Gene ID: HRGMv2_2167_1_1694
Type: TC
Location: 1821846 - 1822592 (+)
Gene ID: HRGMv2_2167_1_1695
Type: TC
Location: 1822589 - 1823371 (+)
Gene ID: HRGMv2_2167_1_1696
Type: pfam
Location: 1823442 - 1824233 (+)
Gene ID: HRGMv2_2167_1_1697
Type: TC
Location: 1824391 - 1825488 (+)
Gene ID: HRGMv2_2167_1_1698
Type: TC
Location: 1825532 - 1826311 (+)
Gene ID: HRGMv2_2167_1_1699
Type: pfam
Location: 1826530 - 1827285 (+)
Gene ID: HRGMv2_2167_1_1700
Type: TC
Location: 1827467 - 1829320 (+)
Gene ID: HRGMv2_2167_1_1701
Type: CAZyme
Location: 1829512 - 1831446 (+)
Gene ID: HRGMv2_2167_1_1702
Type: TF
Location: 1831494 - 1833098 (+)
Gene ID: HRGMv2_2167_1_1703
Type: TC
Location: 1833098 - 1833874 (+)
Gene ID: HRGMv2_2167_1_1704
Type: pfam
Location: 1833864 - 1835285 (+)
Gene ID: HRGMv2_2167_1_1705
Type: pfam
Location: 1835285 - 1836514 (+)
Gene ID: HRGMv2_2167_1_1706
Type: TC
Location: 1836504 - 1837469 (+)
Gene ID: HRGMv2_2167_1_1707
Type: TC
Location: 1837666 - 1839345 (+)
Gene ID: HRGMv2_2167_1_1708
Type: TC
Location: 1839433 - 1840404 (+)
Gene ID: HRGMv2_2167_1_1709
Type: TC
Location: 1840406 - 1841269 (+)
Gene ID: HRGMv2_2167_1_1710
Type: TC
Location: 1841284 - 1842291 (+)
Gene ID: HRGMv2_2167_1_1711
Type: TC
Location: 1842295 - 1843245 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2167_1_1686 vegetarian > omnivore 1.98190 0.02695

🧭 Explore Read Mapping of CGC

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