Cluster: HRGMv2_2166_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2166
- CGC Family ID: CGCFAM_04978
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_833 | 965253 | 967484 | - | GH13_18 |
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_834 | 967564 | 969750 | - | GH36 |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_835 | 969767 | 970621 | - | 3.A.1.1.28 |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_836 | 970621 | 971502 | - | 3.A.1.1.28 |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_837 | 971513 | 972796 | - | 3.A.1.1.28 |
| TF | HRGMv2_2166_1 | HRGMv2_2166_1_838 | 973097 | 973957 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_839 | 974339 | 978052 | - | GH51_2 |
| pfam | HRGMv2_2166_1 | HRGMv2_2166_1_840 | 978362 | 980734 | - | FtsX | FtsX |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_841 | 980746 | 981501 | - | 3.A.1.134.6 |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_842 | 981533 | 983644 | - | 1.B.52.2.1 |
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_843 | 984047 | 985225 | + | CE1 |
Gene ID: HRGMv2_2166_1_833
Type: CAZyme
Location: 965253 - 967484 (-)
Type: CAZyme
Location: 965253 - 967484 (-)
Gene ID: HRGMv2_2166_1_834
Type: CAZyme
Location: 967564 - 969750 (-)
Type: CAZyme
Location: 967564 - 969750 (-)
Gene ID: HRGMv2_2166_1_835
Type: TC
Location: 969767 - 970621 (-)
Type: TC
Location: 969767 - 970621 (-)
Gene ID: HRGMv2_2166_1_836
Type: TC
Location: 970621 - 971502 (-)
Type: TC
Location: 970621 - 971502 (-)
Gene ID: HRGMv2_2166_1_837
Type: TC
Location: 971513 - 972796 (-)
Type: TC
Location: 971513 - 972796 (-)
Gene ID: HRGMv2_2166_1_838
Type: TF
Location: 973097 - 973957 (+)
Type: TF
Location: 973097 - 973957 (+)
Gene ID: HRGMv2_2166_1_839
Type: CAZyme
Location: 974339 - 978052 (-)
Type: CAZyme
Location: 974339 - 978052 (-)
Gene ID: HRGMv2_2166_1_840
Type: pfam
Location: 978362 - 980734 (-)
Type: pfam
Location: 978362 - 980734 (-)
Gene ID: HRGMv2_2166_1_841
Type: TC
Location: 980746 - 981501 (-)
Type: TC
Location: 980746 - 981501 (-)
Gene ID: HRGMv2_2166_1_842
Type: TC
Location: 981533 - 983644 (-)
Type: TC
Location: 981533 - 983644 (-)
Gene ID: HRGMv2_2166_1_843
Type: CAZyme
Location: 984047 - 985225 (+)
Type: CAZyme
Location: 984047 - 985225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2166_1_837 | vegan > omnivore | 2.21213 | 0.00067 |
| HRGMv2_2166_1_839 | vegan > omnivore | 2.05997 | 0.00067 |
| HRGMv2_2166_1_839 | vegetarian > omnivore | 1.09862 | 0.01909 |