dbCAN Logo

Cluster: HRGMv2_2166_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2166_1 HRGMv2_2166_1_592 711703 712695 - 8.A.5.1.3
TC HRGMv2_2166_1 HRGMv2_2166_1_593 713138 714871 - 3.A.1.21.1
TC HRGMv2_2166_1 HRGMv2_2166_1_594 714868 716658 - 3.A.1.21.1
STP HRGMv2_2166_1 HRGMv2_2166_1_595 716816 717430 - TetR_N
pfam HRGMv2_2166_1 HRGMv2_2166_1_596 717536 718699 - AAA-ATPase_like
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_597 718974 719777 + CE4
Gene ID: HRGMv2_2166_1_592
Type: TC
Location: 711703 - 712695 (-)
Gene ID: HRGMv2_2166_1_593
Type: TC
Location: 713138 - 714871 (-)
Gene ID: HRGMv2_2166_1_594
Type: TC
Location: 714868 - 716658 (-)
Gene ID: HRGMv2_2166_1_595
Type: STP
Location: 716816 - 717430 (-)
Gene ID: HRGMv2_2166_1_596
Type: pfam
Location: 717536 - 718699 (-)
Gene ID: HRGMv2_2166_1_597
Type: CAZyme
Location: 718974 - 719777 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List