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Cluster: HRGMv2_2166_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2166_1 HRGMv2_2166_1_2740 3277250 3277891 + 9.B.156.3.1
TF HRGMv2_2166_1 HRGMv2_2166_1_2741 3278117 3279118 + LacI
TC HRGMv2_2166_1 HRGMv2_2166_1_2742 3279582 3281369 + 3.A.1.106.14
TC HRGMv2_2166_1 HRGMv2_2166_1_2743 3281549 3283330 + 3.A.1.106.3
pfam HRGMv2_2166_1 HRGMv2_2166_1_2744 3283541 3285472 + Sulfatase
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_2745 3285508 3286995 + GT2
NULL(UNKNOWN) HRGMv2_2166_1 HRGMv2_2166_1_2746 3287071 3287925 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2166_1 HRGMv2_2166_1_2747 3288207 3288707 + GreA_GreB | GreA_GreB_N
TC HRGMv2_2166_1 HRGMv2_2166_1_2748 3288754 3290484 + 1.B.52.2.2
TC HRGMv2_2166_1 HRGMv2_2166_1_2749 3290861 3291544 + 3.A.1.125.1
Gene ID: HRGMv2_2166_1_2740
Type: TC
Location: 3277250 - 3277891 (+)
Gene ID: HRGMv2_2166_1_2741
Type: TF
Location: 3278117 - 3279118 (+)
Gene ID: HRGMv2_2166_1_2742
Type: TC
Location: 3279582 - 3281369 (+)
Gene ID: HRGMv2_2166_1_2743
Type: TC
Location: 3281549 - 3283330 (+)
Gene ID: HRGMv2_2166_1_2744
Type: pfam
Location: 3283541 - 3285472 (+)
Gene ID: HRGMv2_2166_1_2745
Type: CAZyme
Location: 3285508 - 3286995 (+)
Gene ID: HRGMv2_2166_1_2746
Type:
Location: 3287071 - 3287925 (-)
Gene ID: HRGMv2_2166_1_2747
Type: pfam
Location: 3288207 - 3288707 (+)
Gene ID: HRGMv2_2166_1_2748
Type: TC
Location: 3288754 - 3290484 (+)
Gene ID: HRGMv2_2166_1_2749
Type: TC
Location: 3290861 - 3291544 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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