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Cluster: HRGMv2_2166_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2166_1 HRGMv2_2166_1_309 374173 375543 + 1.B.52.2.1
peptidase HRGMv2_2166_1 HRGMv2_2166_1_310 375818 376996 + M20.UPD
TC HRGMv2_2166_1 HRGMv2_2166_1_311 377132 378550 + 2.A.1.3.33
STP HRGMv2_2166_1 HRGMv2_2166_1_312 378662 380701 + HATPase_c | HisKA | Response_reg
pfam HRGMv2_2166_1 HRGMv2_2166_1_313 380843 382555 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_314 382661 384841 + GH36
Gene ID: HRGMv2_2166_1_309
Type: TC
Location: 374173 - 375543 (+)
Gene ID: HRGMv2_2166_1_310
Type: peptidase
Location: 375818 - 376996 (+)
Gene ID: HRGMv2_2166_1_311
Type: TC
Location: 377132 - 378550 (+)
Gene ID: HRGMv2_2166_1_312
Type: STP
Location: 378662 - 380701 (+)
Gene ID: HRGMv2_2166_1_313
Type: pfam
Location: 380843 - 382555 (+)
Gene ID: HRGMv2_2166_1_314
Type: CAZyme
Location: 382661 - 384841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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