dbCAN Logo

Cluster: HRGMv2_2166_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2166_1 HRGMv2_2166_1_2372 2829646 2830269 - 2.A.115.2.14
TC HRGMv2_2166_1 HRGMv2_2166_1_2373 2830406 2831116 - 3.A.1.4.10
TC HRGMv2_2166_1 HRGMv2_2166_1_2374 2831243 2832004 - 3.A.1.4.10
TC HRGMv2_2166_1 HRGMv2_2166_1_2375 2832006 2833064 - 3.A.1.4.8
TC HRGMv2_2166_1 HRGMv2_2166_1_2376 2833079 2833963 - 3.A.1.4.10
TC HRGMv2_2166_1 HRGMv2_2166_1_2377 2834187 2835353 - 3.A.1.4.10
TC HRGMv2_2166_1 HRGMv2_2166_1_2378 2835524 2836888 - 2.A.66.1.32
TC HRGMv2_2166_1 HRGMv2_2166_1_2379 2837066 2839120 - 1.B.52.2.1
NULL(UNKNOWN) HRGMv2_2166_1 HRGMv2_2166_1_2380 2839460 2839630 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2166_1 HRGMv2_2166_1_2381 2839746 2839943 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2166_1 HRGMv2_2166_1_2382 2839969 2841156 - 2.A.27.1.3
STP HRGMv2_2166_1 HRGMv2_2166_1_2383 2841251 2842207 - SBP_bac_3
TC HRGMv2_2166_1 HRGMv2_2166_1_2384 2842575 2843486 + 1.A.35.3.2
pfam HRGMv2_2166_1 HRGMv2_2166_1_2385 2843765 2844193 + HSP20
sulfatase HRGMv2_2166_1 HRGMv2_2166_1_2386 2844244 2845458 + S1_7
TC HRGMv2_2166_1 HRGMv2_2166_1_2387 2845917 2847251 + 3.A.1.1.45
TC HRGMv2_2166_1 HRGMv2_2166_1_2388 2847513 2848355 + 3.A.1.1.45
TC HRGMv2_2166_1 HRGMv2_2166_1_2389 2848355 2849185 + 3.A.1.1.45
TF HRGMv2_2166_1 HRGMv2_2166_1_2390 2849306 2850307 + LacI
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_2391 2850513 2851973 + GH77
TF HRGMv2_2166_1 HRGMv2_2166_1_2392 2851979 2852851 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_2393 2853411 2855663 + GT35
pfam HRGMv2_2166_1 HRGMv2_2166_1_2394 2855905 2857995 + MCRA | NAD_binding_8
pfam HRGMv2_2166_1 HRGMv2_2166_1_2395 2858335 2859918 + AAA-ATPase_like | PDDEXK_3 | AAA_35
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_2396 2859965 2861521 + GH13_44
TC HRGMv2_2166_1 HRGMv2_2166_1_2397 2862224 2864002 + 1.B.52.2.1
TC HRGMv2_2166_1 HRGMv2_2166_1_2398 2864249 2865964 + 3.A.15.4.1
TC HRGMv2_2166_1 HRGMv2_2166_1_2399 2865976 2867193 + 3.A.15.2.1
TC HRGMv2_2166_1 HRGMv2_2166_1_2400 2867231 2868442 + 3.A.11.1.3
pfam HRGMv2_2166_1 HRGMv2_2166_1_2401 2868789 2869289 + N_methyl
TC HRGMv2_2166_1 HRGMv2_2166_1_2402 2869311 2870072 + 3.A.15.2.1
Gene ID: HRGMv2_2166_1_2372
Type: TC
Location: 2829646 - 2830269 (-)
Gene ID: HRGMv2_2166_1_2373
Type: TC
Location: 2830406 - 2831116 (-)
Gene ID: HRGMv2_2166_1_2374
Type: TC
Location: 2831243 - 2832004 (-)
Gene ID: HRGMv2_2166_1_2375
Type: TC
Location: 2832006 - 2833064 (-)
Gene ID: HRGMv2_2166_1_2376
Type: TC
Location: 2833079 - 2833963 (-)
Gene ID: HRGMv2_2166_1_2377
Type: TC
Location: 2834187 - 2835353 (-)
Gene ID: HRGMv2_2166_1_2378
Type: TC
Location: 2835524 - 2836888 (-)
Gene ID: HRGMv2_2166_1_2379
Type: TC
Location: 2837066 - 2839120 (-)
Gene ID: HRGMv2_2166_1_2380
Type:
Location: 2839460 - 2839630 (+)
Gene ID: HRGMv2_2166_1_2381
Type:
Location: 2839746 - 2839943 (-)
Gene ID: HRGMv2_2166_1_2382
Type: TC
Location: 2839969 - 2841156 (-)
Gene ID: HRGMv2_2166_1_2383
Type: STP
Location: 2841251 - 2842207 (-)
Gene ID: HRGMv2_2166_1_2384
Type: TC
Location: 2842575 - 2843486 (+)
Gene ID: HRGMv2_2166_1_2385
Type: pfam
Location: 2843765 - 2844193 (+)
Gene ID: HRGMv2_2166_1_2386
Type: sulfatase
Location: 2844244 - 2845458 (+)
Gene ID: HRGMv2_2166_1_2387
Type: TC
Location: 2845917 - 2847251 (+)
Gene ID: HRGMv2_2166_1_2388
Type: TC
Location: 2847513 - 2848355 (+)
Gene ID: HRGMv2_2166_1_2389
Type: TC
Location: 2848355 - 2849185 (+)
Gene ID: HRGMv2_2166_1_2390
Type: TF
Location: 2849306 - 2850307 (+)
Gene ID: HRGMv2_2166_1_2391
Type: CAZyme
Location: 2850513 - 2851973 (+)
Gene ID: HRGMv2_2166_1_2392
Type: TF
Location: 2851979 - 2852851 (-)
Gene ID: HRGMv2_2166_1_2393
Type: CAZyme
Location: 2853411 - 2855663 (+)
Gene ID: HRGMv2_2166_1_2394
Type: pfam
Location: 2855905 - 2857995 (+)
Gene ID: HRGMv2_2166_1_2395
Type: pfam
Location: 2858335 - 2859918 (+)
Gene ID: HRGMv2_2166_1_2396
Type: CAZyme
Location: 2859965 - 2861521 (+)
Gene ID: HRGMv2_2166_1_2397
Type: TC
Location: 2862224 - 2864002 (+)
Gene ID: HRGMv2_2166_1_2398
Type: TC
Location: 2864249 - 2865964 (+)
Gene ID: HRGMv2_2166_1_2399
Type: TC
Location: 2865976 - 2867193 (+)
Gene ID: HRGMv2_2166_1_2400
Type: TC
Location: 2867231 - 2868442 (+)
Gene ID: HRGMv2_2166_1_2401
Type: pfam
Location: 2868789 - 2869289 (+)
Gene ID: HRGMv2_2166_1_2402
Type: TC
Location: 2869311 - 2870072 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2166_1_2377 vegan > omnivore 1.00233 0.00067
HRGMv2_2166_1_2377 vegetarian > omnivore 1.00974 0.01909
HRGMv2_2166_1_2381 vegetarian > omnivore 1.24176 0.01909
HRGMv2_2166_1_2381 vegetarian > vegan 3.27258 0.01582
HRGMv2_2166_1_2388 vegetarian > omnivore 1.54480 0.01909
HRGMv2_2166_1_2388 vegan > omnivore 2.67779 0.00067
HRGMv2_2166_1_2389 vegan > omnivore 1.52823 0.00067

🧭 Explore Read Mapping of CGC

← Back to Cluster List