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Cluster: HRGMv2_2166_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2166_1 HRGMv2_2166_1_2237 2673757 2674401 + 3.A.1.124.1
TC HRGMv2_2166_1 HRGMv2_2166_1_2238 2674801 2675463 + 1.A.62.2.1
TF HRGMv2_2166_1 HRGMv2_2166_1_2239 2675517 2676257 + LytTR
pfam HRGMv2_2166_1 HRGMv2_2166_1_2240 2676267 2676989 + HATPase_c_5 | SPOB_a
TC HRGMv2_2166_1 HRGMv2_2166_1_2241 2677196 2679034 + 3.A.1.111.2
TC HRGMv2_2166_1 HRGMv2_2166_1_2242 2679037 2680881 + 3.A.1.111.2
pfam HRGMv2_2166_1 HRGMv2_2166_1_2243 2681123 2682868 + PDDEXK_9 | AAA-ATPase_like
TF HRGMv2_2166_1 HRGMv2_2166_1_2244 2682843 2683703 + HTH_AraC
TC HRGMv2_2166_1 HRGMv2_2166_1_2245 2684034 2685359 + 2.A.2.3.3
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_2246 2685359 2687005 + CBM91 | GH43_11
Gene ID: HRGMv2_2166_1_2237
Type: TC
Location: 2673757 - 2674401 (+)
Gene ID: HRGMv2_2166_1_2238
Type: TC
Location: 2674801 - 2675463 (+)
Gene ID: HRGMv2_2166_1_2239
Type: TF
Location: 2675517 - 2676257 (+)
Gene ID: HRGMv2_2166_1_2240
Type: pfam
Location: 2676267 - 2676989 (+)
Gene ID: HRGMv2_2166_1_2241
Type: TC
Location: 2677196 - 2679034 (+)
Gene ID: HRGMv2_2166_1_2242
Type: TC
Location: 2679037 - 2680881 (+)
Gene ID: HRGMv2_2166_1_2243
Type: pfam
Location: 2681123 - 2682868 (+)
Gene ID: HRGMv2_2166_1_2244
Type: TF
Location: 2682843 - 2683703 (+)
Gene ID: HRGMv2_2166_1_2245
Type: TC
Location: 2684034 - 2685359 (+)
Gene ID: HRGMv2_2166_1_2246
Type: CAZyme
Location: 2685359 - 2687005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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