Cluster: HRGMv2_2166_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2166
- CGC Family ID: CGCFAM_03464
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_1621 | 1923239 | 1925149 | - | 4.A.2.1.4 |
| STP | HRGMv2_2166_1 | HRGMv2_2166_1_1622 | 1925204 | 1926127 | - | PfkB |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_1623 | 1927086 | 1928183 | + | 8.A.59.4.2 |
| NULL(UNKNOWN) | HRGMv2_2166_1 | HRGMv2_2166_1_1624 | 1928381 | 1928761 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2166_1 | HRGMv2_2166_1_1625 | 1928854 | 1929195 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_1626 | 1929284 | 1931419 | - | GH42 |
| pfam | HRGMv2_2166_1 | HRGMv2_2166_1_1627 | 1931466 | 1933451 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_1628 | 1933512 | 1934774 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2166_1 | HRGMv2_2166_1_1629 | 1935107 | 1936195 | - | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2166_1 | HRGMv2_2166_1_1630 | 1936541 | 1937653 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_2166_1 | HRGMv2_2166_1_1631 | 1937990 | 1938784 | - | GT26 |
Gene ID: HRGMv2_2166_1_1621
Type: TC
Location: 1923239 - 1925149 (-)
Type: TC
Location: 1923239 - 1925149 (-)
Gene ID: HRGMv2_2166_1_1622
Type: STP
Location: 1925204 - 1926127 (-)
Type: STP
Location: 1925204 - 1926127 (-)
Gene ID: HRGMv2_2166_1_1623
Type: TC
Location: 1927086 - 1928183 (+)
Type: TC
Location: 1927086 - 1928183 (+)
Gene ID: HRGMv2_2166_1_1624
Type:
Location: 1928381 - 1928761 (-)
Type:
Location: 1928381 - 1928761 (-)
Gene ID: HRGMv2_2166_1_1625
Type:
Location: 1928854 - 1929195 (-)
Type:
Location: 1928854 - 1929195 (-)
Gene ID: HRGMv2_2166_1_1626
Type: CAZyme
Location: 1929284 - 1931419 (-)
Type: CAZyme
Location: 1929284 - 1931419 (-)
Gene ID: HRGMv2_2166_1_1627
Type: pfam
Location: 1931466 - 1933451 (-)
Type: pfam
Location: 1931466 - 1933451 (-)
Gene ID: HRGMv2_2166_1_1628
Type: TC
Location: 1933512 - 1934774 (-)
Type: TC
Location: 1933512 - 1934774 (-)
Gene ID: HRGMv2_2166_1_1629
Type: pfam
Location: 1935107 - 1936195 (-)
Type: pfam
Location: 1935107 - 1936195 (-)
Gene ID: HRGMv2_2166_1_1630
Type: TC
Location: 1936541 - 1937653 (-)
Type: TC
Location: 1936541 - 1937653 (-)
Gene ID: HRGMv2_2166_1_1631
Type: CAZyme
Location: 1937990 - 1938784 (-)
Type: CAZyme
Location: 1937990 - 1938784 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2166_1_1625 | vegetarian > omnivore | 1.88268 | 0.01909 |
| HRGMv2_2166_1_1625 | vegetarian > vegan | 1.81659 | 0.03511 |