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Cluster: HRGMv2_2166_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_1118 1308137 1309069 - GT2
NULL(UNKNOWN) HRGMv2_2166_1 HRGMv2_2166_1_1119 1309103 1310467 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2166_1 HRGMv2_2166_1_1120 1310592 1312118 - 2.A.15.2.3
pfam HRGMv2_2166_1 HRGMv2_2166_1_1121 1312164 1312877 - NTP_transferase | NTP_transf_3
TF HRGMv2_2166_1 HRGMv2_2166_1_1122 1312893 1314653 - 0040266
CAZyme HRGMv2_2166_1 HRGMv2_2166_1_1123 1314743 1315867 - GT2
Gene ID: HRGMv2_2166_1_1118
Type: CAZyme
Location: 1308137 - 1309069 (-)
Gene ID: HRGMv2_2166_1_1119
Type:
Location: 1309103 - 1310467 (-)
Gene ID: HRGMv2_2166_1_1120
Type: TC
Location: 1310592 - 1312118 (-)
Gene ID: HRGMv2_2166_1_1121
Type: pfam
Location: 1312164 - 1312877 (-)
Gene ID: HRGMv2_2166_1_1122
Type: TF
Location: 1312893 - 1314653 (-)
Gene ID: HRGMv2_2166_1_1123
Type: CAZyme
Location: 1314743 - 1315867 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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