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Cluster: HRGMv2_2157_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_118 HRGMv2_2157_118_2 1497 2669 + GH5_44
TC HRGMv2_2157_118 HRGMv2_2157_118_3 2698 4083 + 2.A.2.3.3
CAZyme HRGMv2_2157_118 HRGMv2_2157_118_4 4098 6104 + GH42
CAZyme HRGMv2_2157_118 HRGMv2_2157_118_5 6101 7438 + GH30_1
CAZyme HRGMv2_2157_118 HRGMv2_2157_118_6 7454 9100 + CBM91 | GH43_11
Gene ID: HRGMv2_2157_118_2
Type: CAZyme
Location: 1497 - 2669 (+)
Gene ID: HRGMv2_2157_118_3
Type: TC
Location: 2698 - 4083 (+)
Gene ID: HRGMv2_2157_118_4
Type: CAZyme
Location: 4098 - 6104 (+)
Gene ID: HRGMv2_2157_118_5
Type: CAZyme
Location: 6101 - 7438 (+)
Gene ID: HRGMv2_2157_118_6
Type: CAZyme
Location: 7454 - 9100 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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