Cluster: HRGMv2_2157_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2157
- CGC Family ID: CGCFAM_01392
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2157_117 | HRGMv2_2157_117_7 | 5542 | 7002 | + | 3.A.1.1.27 |
| TC | HRGMv2_2157_117 | HRGMv2_2157_117_8 | 6999 | 7853 | + | 3.A.1.1.27 |
| pfam | HRGMv2_2157_117 | HRGMv2_2157_117_9 | 7871 | 8647 | + | TraX |
| CAZyme | HRGMv2_2157_117 | HRGMv2_2157_117_10 | 8660 | 10687 | + | GH42 |
| pfam | HRGMv2_2157_117 | HRGMv2_2157_117_11 | 10684 | 11595 | - | Cation_efflux |
| TC | HRGMv2_2157_117 | HRGMv2_2157_117_12 | 11723 | 12382 | - | 1.C.113.1.2 |
Gene ID: HRGMv2_2157_117_7
Type: TC
Location: 5542 - 7002 (+)
Type: TC
Location: 5542 - 7002 (+)
Gene ID: HRGMv2_2157_117_8
Type: TC
Location: 6999 - 7853 (+)
Type: TC
Location: 6999 - 7853 (+)
Gene ID: HRGMv2_2157_117_9
Type: pfam
Location: 7871 - 8647 (+)
Type: pfam
Location: 7871 - 8647 (+)
Gene ID: HRGMv2_2157_117_10
Type: CAZyme
Location: 8660 - 10687 (+)
Type: CAZyme
Location: 8660 - 10687 (+)
Gene ID: HRGMv2_2157_117_11
Type: pfam
Location: 10684 - 11595 (-)
Type: pfam
Location: 10684 - 11595 (-)
Gene ID: HRGMv2_2157_117_12
Type: TC
Location: 11723 - 12382 (-)
Type: TC
Location: 11723 - 12382 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900547615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2157_117_8 | vegan > omnivore | 1.51507 | 0.02017 |