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Cluster: HRGMv2_2157_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_93 HRGMv2_2157_93_8 7516 8961 - GH165
pfam HRGMv2_2157_93 HRGMv2_2157_93_9 8991 9911 - DHDPS
pfam HRGMv2_2157_93 HRGMv2_2157_93_10 9914 10375 - DUF386
TC HRGMv2_2157_93 HRGMv2_2157_93_11 10390 11391 - 3.A.1.5.12
TC HRGMv2_2157_93 HRGMv2_2157_93_12 11393 12421 - 3.A.1.5.12
TC HRGMv2_2157_93 HRGMv2_2157_93_13 12434 13330 - 3.A.1.5.20
TC HRGMv2_2157_93 HRGMv2_2157_93_14 13348 14379 - 3.A.1.5.20
TC HRGMv2_2157_93 HRGMv2_2157_93_15 14418 15971 - 3.A.1.5.34
Gene ID: HRGMv2_2157_93_8
Type: CAZyme
Location: 7516 - 8961 (-)
Gene ID: HRGMv2_2157_93_9
Type: pfam
Location: 8991 - 9911 (-)
Gene ID: HRGMv2_2157_93_10
Type: pfam
Location: 9914 - 10375 (-)
Gene ID: HRGMv2_2157_93_11
Type: TC
Location: 10390 - 11391 (-)
Gene ID: HRGMv2_2157_93_12
Type: TC
Location: 11393 - 12421 (-)
Gene ID: HRGMv2_2157_93_13
Type: TC
Location: 12434 - 13330 (-)
Gene ID: HRGMv2_2157_93_14
Type: TC
Location: 13348 - 14379 (-)
Gene ID: HRGMv2_2157_93_15
Type: TC
Location: 14418 - 15971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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