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Cluster: HRGMv2_2157_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_75 80380 81483 + CE9
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_76 81615 82913 + CE4
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_77 83143 84495 + GH13_20
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_78 84518 86389 + CBM48 | GH13_9
NULL(UNKNOWN) HRGMv2_2157_84 HRGMv2_2157_84_79 86496 86729 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2157_84 HRGMv2_2157_84_80 86799 87881 + 9.B.10.1.1
Gene ID: HRGMv2_2157_84_75
Type: CAZyme
Location: 80380 - 81483 (+)
Gene ID: HRGMv2_2157_84_76
Type: CAZyme
Location: 81615 - 82913 (+)
Gene ID: HRGMv2_2157_84_77
Type: CAZyme
Location: 83143 - 84495 (+)
Gene ID: HRGMv2_2157_84_78
Type: CAZyme
Location: 84518 - 86389 (+)
Gene ID: HRGMv2_2157_84_79
Type:
Location: 86496 - 86729 (+)
Gene ID: HRGMv2_2157_84_80
Type: TC
Location: 86799 - 87881 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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