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Cluster: HRGMv2_2157_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_56 60150 62612 + GT35
TC HRGMv2_2157_84 HRGMv2_2157_84_57 62724 63335 + 9.B.156.3.1
STP HRGMv2_2157_84 HRGMv2_2157_84_58 63443 64750 + Aminotran_1_2
NULL(UNKNOWN) HRGMv2_2157_84 HRGMv2_2157_84_59 64851 65267 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2157_84 HRGMv2_2157_84_60 65325 65852 + 9.B.156.3.1
pfam HRGMv2_2157_84 HRGMv2_2157_84_61 65883 66623 - Acyltransferase
pfam HRGMv2_2157_84 HRGMv2_2157_84_62 66761 67165 + PrcB_C
CAZyme HRGMv2_2157_84 HRGMv2_2157_84_63 67205 68761 + CBM50
pfam HRGMv2_2157_84 HRGMv2_2157_84_64 68834 69697 + GHMP_kinases_N | GHMP_kinases_C
TF HRGMv2_2157_84 HRGMv2_2157_84_65 69716 70408 + GntR
TC HRGMv2_2157_84 HRGMv2_2157_84_66 70450 72018 + 9.A.11.1.2
Gene ID: HRGMv2_2157_84_56
Type: CAZyme
Location: 60150 - 62612 (+)
Gene ID: HRGMv2_2157_84_57
Type: TC
Location: 62724 - 63335 (+)
Gene ID: HRGMv2_2157_84_58
Type: STP
Location: 63443 - 64750 (+)
Gene ID: HRGMv2_2157_84_59
Type:
Location: 64851 - 65267 (+)
Gene ID: HRGMv2_2157_84_60
Type: TC
Location: 65325 - 65852 (+)
Gene ID: HRGMv2_2157_84_61
Type: pfam
Location: 65883 - 66623 (-)
Gene ID: HRGMv2_2157_84_62
Type: pfam
Location: 66761 - 67165 (+)
Gene ID: HRGMv2_2157_84_63
Type: CAZyme
Location: 67205 - 68761 (+)
Gene ID: HRGMv2_2157_84_64
Type: pfam
Location: 68834 - 69697 (+)
Gene ID: HRGMv2_2157_84_65
Type: TF
Location: 69716 - 70408 (+)
Gene ID: HRGMv2_2157_84_66
Type: TC
Location: 70450 - 72018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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