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Cluster: HRGMv2_2157_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2157_80 HRGMv2_2157_80_25 24371 26161 - 9.B.33.1.1
STP HRGMv2_2157_80 HRGMv2_2157_80_26 26327 27643 + SBP_bac_1
TC HRGMv2_2157_80 HRGMv2_2157_80_27 27679 28554 + 3.A.1.1.34
TC HRGMv2_2157_80 HRGMv2_2157_80_28 28554 29378 + 3.A.1.1.45
CAZyme HRGMv2_2157_80 HRGMv2_2157_80_29 29388 31367 + GH151
TC HRGMv2_2157_80 HRGMv2_2157_80_30 31505 33838 + 9.A.8.1.6
Gene ID: HRGMv2_2157_80_25
Type: TC
Location: 24371 - 26161 (-)
Gene ID: HRGMv2_2157_80_26
Type: STP
Location: 26327 - 27643 (+)
Gene ID: HRGMv2_2157_80_27
Type: TC
Location: 27679 - 28554 (+)
Gene ID: HRGMv2_2157_80_28
Type: TC
Location: 28554 - 29378 (+)
Gene ID: HRGMv2_2157_80_29
Type: CAZyme
Location: 29388 - 31367 (+)
Gene ID: HRGMv2_2157_80_30
Type: TC
Location: 31505 - 33838 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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