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Cluster: HRGMv2_2157_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2157_60 HRGMv2_2157_60_1 696 2369 - 3.A.1.1.9
TC HRGMv2_2157_60 HRGMv2_2157_60_2 2350 4047 - 9.B.33.1.1
TF HRGMv2_2157_60 HRGMv2_2157_60_3 4022 5560 - HTH_AraC | HTH_AraC
TC HRGMv2_2157_60 HRGMv2_2157_60_4 5673 6509 - 3.A.1.1.45
TC HRGMv2_2157_60 HRGMv2_2157_60_5 6509 7414 - 3.A.1.1.45
TC HRGMv2_2157_60 HRGMv2_2157_60_6 7431 8753 - 3.A.1.1.45
pfam HRGMv2_2157_60 HRGMv2_2157_60_7 8936 9799 - F_bP_aldolase
TF HRGMv2_2157_60 HRGMv2_2157_60_8 10095 10445 + HTH_5
CAZyme HRGMv2_2157_60 HRGMv2_2157_60_9 10542 12647 - CBM34 | GH13_39
Gene ID: HRGMv2_2157_60_1
Type: TC
Location: 696 - 2369 (-)
Gene ID: HRGMv2_2157_60_2
Type: TC
Location: 2350 - 4047 (-)
Gene ID: HRGMv2_2157_60_3
Type: TF
Location: 4022 - 5560 (-)
Gene ID: HRGMv2_2157_60_4
Type: TC
Location: 5673 - 6509 (-)
Gene ID: HRGMv2_2157_60_5
Type: TC
Location: 6509 - 7414 (-)
Gene ID: HRGMv2_2157_60_6
Type: TC
Location: 7431 - 8753 (-)
Gene ID: HRGMv2_2157_60_7
Type: pfam
Location: 8936 - 9799 (-)
Gene ID: HRGMv2_2157_60_8
Type: TF
Location: 10095 - 10445 (+)
Gene ID: HRGMv2_2157_60_9
Type: CAZyme
Location: 10542 - 12647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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