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Cluster: HRGMv2_2157_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_57 HRGMv2_2157_57_3 1906 2589 - CE4
TC HRGMv2_2157_57 HRGMv2_2157_57_4 2672 3301 - 2.A.115.2.14
TC HRGMv2_2157_57 HRGMv2_2157_57_5 3316 4026 - 3.A.1.4.10
TC HRGMv2_2157_57 HRGMv2_2157_57_6 4039 4797 - 3.A.1.4.10
TC HRGMv2_2157_57 HRGMv2_2157_57_7 4799 5851 - 3.A.1.4.8
TC HRGMv2_2157_57 HRGMv2_2157_57_8 5861 6745 - 3.A.1.4.10
TC HRGMv2_2157_57 HRGMv2_2157_57_9 6842 7993 - 3.A.1.4.10
Gene ID: HRGMv2_2157_57_3
Type: CAZyme
Location: 1906 - 2589 (-)
Gene ID: HRGMv2_2157_57_4
Type: TC
Location: 2672 - 3301 (-)
Gene ID: HRGMv2_2157_57_5
Type: TC
Location: 3316 - 4026 (-)
Gene ID: HRGMv2_2157_57_6
Type: TC
Location: 4039 - 4797 (-)
Gene ID: HRGMv2_2157_57_7
Type: TC
Location: 4799 - 5851 (-)
Gene ID: HRGMv2_2157_57_8
Type: TC
Location: 5861 - 6745 (-)
Gene ID: HRGMv2_2157_57_9
Type: TC
Location: 6842 - 7993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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