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Cluster: HRGMv2_2157_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2157_47 HRGMv2_2157_47_11 10164 11504 + 2.A.50.2.1
pfam HRGMv2_2157_47 HRGMv2_2157_47_12 11535 12686 + DHHW | ALGX
TC HRGMv2_2157_47 HRGMv2_2157_47_13 12765 14531 - 8.A.59.2.1
TF HRGMv2_2157_47 HRGMv2_2157_47_14 14528 16063 - HTH_AraC
CAZyme HRGMv2_2157_47 HRGMv2_2157_47_15 16102 19125 - GH2
TC HRGMv2_2157_47 HRGMv2_2157_47_16 19151 19990 - 3.A.1.1.4
TC HRGMv2_2157_47 HRGMv2_2157_47_17 19983 20879 - 3.A.1.1.4
TC HRGMv2_2157_47 HRGMv2_2157_47_18 20959 22242 - 3.A.1.1.4
Gene ID: HRGMv2_2157_47_11
Type: TC
Location: 10164 - 11504 (+)
Gene ID: HRGMv2_2157_47_12
Type: pfam
Location: 11535 - 12686 (+)
Gene ID: HRGMv2_2157_47_13
Type: TC
Location: 12765 - 14531 (-)
Gene ID: HRGMv2_2157_47_14
Type: TF
Location: 14528 - 16063 (-)
Gene ID: HRGMv2_2157_47_15
Type: CAZyme
Location: 16102 - 19125 (-)
Gene ID: HRGMv2_2157_47_16
Type: TC
Location: 19151 - 19990 (-)
Gene ID: HRGMv2_2157_47_17
Type: TC
Location: 19983 - 20879 (-)
Gene ID: HRGMv2_2157_47_18
Type: TC
Location: 20959 - 22242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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