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Cluster: HRGMv2_2157_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_2 HRGMv2_2157_2_3 2257 3945 - GT2 | GT2
pfam HRGMv2_2157_2 HRGMv2_2157_2_4 3985 4896 - Ubie_methyltran | CMAS | TehB | MTS | MetW | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2157_2 HRGMv2_2157_2_5 4907 6208 - 3.A.1.103.1
TC HRGMv2_2157_2 HRGMv2_2157_2_6 6219 7004 - 3.A.1.104.1
pfam HRGMv2_2157_2 HRGMv2_2157_2_7 6980 7867 - Glycos_transf_2
CAZyme HRGMv2_2157_2 HRGMv2_2157_2_8 7884 8876 - GT2
pfam HRGMv2_2157_2 HRGMv2_2157_2_9 8888 9709 - Glycos_transf_2
pfam HRGMv2_2157_2 HRGMv2_2157_2_10 9699 10103 - DUF2304
CAZyme HRGMv2_2157_2 HRGMv2_2157_2_11 10107 10805 - GT2
Gene ID: HRGMv2_2157_2_3
Type: CAZyme
Location: 2257 - 3945 (-)
Gene ID: HRGMv2_2157_2_4
Type: pfam
Location: 3985 - 4896 (-)
Gene ID: HRGMv2_2157_2_5
Type: TC
Location: 4907 - 6208 (-)
Gene ID: HRGMv2_2157_2_6
Type: TC
Location: 6219 - 7004 (-)
Gene ID: HRGMv2_2157_2_7
Type: pfam
Location: 6980 - 7867 (-)
Gene ID: HRGMv2_2157_2_8
Type: CAZyme
Location: 7884 - 8876 (-)
Gene ID: HRGMv2_2157_2_9
Type: pfam
Location: 8888 - 9709 (-)
Gene ID: HRGMv2_2157_2_10
Type: pfam
Location: 9699 - 10103 (-)
Gene ID: HRGMv2_2157_2_11
Type: CAZyme
Location: 10107 - 10805 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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