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Cluster: HRGMv2_2156_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2156_2 HRGMv2_2156_2_126 128181 129500 - GH29
TC HRGMv2_2156_2 HRGMv2_2156_2_127 129541 130395 - 3.A.1.1.47
TC HRGMv2_2156_2 HRGMv2_2156_2_128 130408 131319 - 3.A.1.1.47
TC HRGMv2_2156_2 HRGMv2_2156_2_129 131401 132669 - 3.A.1.1.47
STP HRGMv2_2156_2 HRGMv2_2156_2_130 132912 134186 - SBP_bac_1
TF HRGMv2_2156_2 HRGMv2_2156_2_131 134158 134919 - HTH_AraC | HTH_AraC
TC HRGMv2_2156_2 HRGMv2_2156_2_132 134894 136651 - 9.B.33.1.1
NULL(UNKNOWN) HRGMv2_2156_2 HRGMv2_2156_2_133 136635 137555 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2156_2 HRGMv2_2156_2_134 138206 139549 - 2.A.66.1.33
CAZyme HRGMv2_2156_2 HRGMv2_2156_2_135 139581 141368 - GH13_9
NULL(UNKNOWN) HRGMv2_2156_2 HRGMv2_2156_2_136 141520 142035 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2156_2 HRGMv2_2156_2_137 142083 143489 - 2.A.66.1.28
Gene ID: HRGMv2_2156_2_126
Type: CAZyme
Location: 128181 - 129500 (-)
Gene ID: HRGMv2_2156_2_127
Type: TC
Location: 129541 - 130395 (-)
Gene ID: HRGMv2_2156_2_128
Type: TC
Location: 130408 - 131319 (-)
Gene ID: HRGMv2_2156_2_129
Type: TC
Location: 131401 - 132669 (-)
Gene ID: HRGMv2_2156_2_130
Type: STP
Location: 132912 - 134186 (-)
Gene ID: HRGMv2_2156_2_131
Type: TF
Location: 134158 - 134919 (-)
Gene ID: HRGMv2_2156_2_132
Type: TC
Location: 134894 - 136651 (-)
Gene ID: HRGMv2_2156_2_133
Type:
Location: 136635 - 137555 (-)
Gene ID: HRGMv2_2156_2_134
Type: TC
Location: 138206 - 139549 (-)
Gene ID: HRGMv2_2156_2_135
Type: CAZyme
Location: 139581 - 141368 (-)
Gene ID: HRGMv2_2156_2_136
Type:
Location: 141520 - 142035 (+)
Gene ID: HRGMv2_2156_2_137
Type: TC
Location: 142083 - 143489 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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