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Cluster: HRGMv2_2156_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2156_10 HRGMv2_2156_10_5 3830 5518 - GT2 | GT2
pfam HRGMv2_2156_10 HRGMv2_2156_10_6 5558 6469 - Ubie_methyltran | CMAS | TehB | MTS | MetW | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2156_10 HRGMv2_2156_10_7 6480 7781 - 3.A.1.103.1
TC HRGMv2_2156_10 HRGMv2_2156_10_8 7792 8577 - 3.A.1.104.1
pfam HRGMv2_2156_10 HRGMv2_2156_10_9 8553 9458 - Glycos_transf_2
CAZyme HRGMv2_2156_10 HRGMv2_2156_10_10 9455 10447 - GT2
pfam HRGMv2_2156_10 HRGMv2_2156_10_11 10459 11280 - Glycos_transf_2
pfam HRGMv2_2156_10 HRGMv2_2156_10_12 11270 11683 - DUF2304
CAZyme HRGMv2_2156_10 HRGMv2_2156_10_13 11687 12385 - GT2
Gene ID: HRGMv2_2156_10_5
Type: CAZyme
Location: 3830 - 5518 (-)
Gene ID: HRGMv2_2156_10_6
Type: pfam
Location: 5558 - 6469 (-)
Gene ID: HRGMv2_2156_10_7
Type: TC
Location: 6480 - 7781 (-)
Gene ID: HRGMv2_2156_10_8
Type: TC
Location: 7792 - 8577 (-)
Gene ID: HRGMv2_2156_10_9
Type: pfam
Location: 8553 - 9458 (-)
Gene ID: HRGMv2_2156_10_10
Type: CAZyme
Location: 9455 - 10447 (-)
Gene ID: HRGMv2_2156_10_11
Type: pfam
Location: 10459 - 11280 (-)
Gene ID: HRGMv2_2156_10_12
Type: pfam
Location: 11270 - 11683 (-)
Gene ID: HRGMv2_2156_10_13
Type: CAZyme
Location: 11687 - 12385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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