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Cluster: HRGMv2_2156_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2156_1 HRGMv2_2156_1_100 119834 120937 + CE9
CAZyme HRGMv2_2156_1 HRGMv2_2156_1_101 121095 122366 + CE4
CAZyme HRGMv2_2156_1 HRGMv2_2156_1_102 122596 123948 + GH13_20
CAZyme HRGMv2_2156_1 HRGMv2_2156_1_103 123970 125841 + CBM48 | GH13_9
NULL(UNKNOWN) HRGMv2_2156_1 HRGMv2_2156_1_104 125948 126181 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2156_1 HRGMv2_2156_1_105 126251 127375 + 9.B.10.1.1
Gene ID: HRGMv2_2156_1_100
Type: CAZyme
Location: 119834 - 120937 (+)
Gene ID: HRGMv2_2156_1_101
Type: CAZyme
Location: 121095 - 122366 (+)
Gene ID: HRGMv2_2156_1_102
Type: CAZyme
Location: 122596 - 123948 (+)
Gene ID: HRGMv2_2156_1_103
Type: CAZyme
Location: 123970 - 125841 (+)
Gene ID: HRGMv2_2156_1_104
Type:
Location: 125948 - 126181 (+)
Gene ID: HRGMv2_2156_1_105
Type: TC
Location: 126251 - 127375 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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