dbCAN Logo

Cluster: HRGMv2_2156_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2156_8 HRGMv2_2156_8_119 126985 128337 - 3.A.1.1.11
TC HRGMv2_2156_8 HRGMv2_2156_8_120 128348 129250 - 3.A.1.1.10
TC HRGMv2_2156_8 HRGMv2_2156_8_121 129497 130822 + 3.A.1.1.7
CAZyme HRGMv2_2156_8 HRGMv2_2156_8_122 130911 132191 + GH109
TC HRGMv2_2156_8 HRGMv2_2156_8_123 132228 134186 + 8.A.59.2.1
TF HRGMv2_2156_8 HRGMv2_2156_8_124 134161 135702 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2156_8 HRGMv2_2156_8_125 135741 137408 + GH123
Gene ID: HRGMv2_2156_8_119
Type: TC
Location: 126985 - 128337 (-)
Gene ID: HRGMv2_2156_8_120
Type: TC
Location: 128348 - 129250 (-)
Gene ID: HRGMv2_2156_8_121
Type: TC
Location: 129497 - 130822 (+)
Gene ID: HRGMv2_2156_8_122
Type: CAZyme
Location: 130911 - 132191 (+)
Gene ID: HRGMv2_2156_8_123
Type: TC
Location: 132228 - 134186 (+)
Gene ID: HRGMv2_2156_8_124
Type: TF
Location: 134161 - 135702 (+)
Gene ID: HRGMv2_2156_8_125
Type: CAZyme
Location: 135741 - 137408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List