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Cluster: HRGMv2_2156_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_61 79395 81539 - GH42
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_62 81559 84153 - GH106
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_63 84185 86764 - CBM67 | GH78
STP HRGMv2_2156_7 HRGMv2_2156_7_64 86911 88656 - SBP_bac_1
TC HRGMv2_2156_7 HRGMv2_2156_7_65 88769 89677 - 3.A.1.1.29
TC HRGMv2_2156_7 HRGMv2_2156_7_66 89693 90643 - 3.A.1.1.10
TC HRGMv2_2156_7 HRGMv2_2156_7_67 90919 92718 + 8.A.59.2.1
TF HRGMv2_2156_7 HRGMv2_2156_7_68 92810 93637 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_2156_7 HRGMv2_2156_7_69 93678 95300 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_70 95471 96871 + CE20
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_71 96910 98346 + GH29
Gene ID: HRGMv2_2156_7_61
Type: CAZyme
Location: 79395 - 81539 (-)
Gene ID: HRGMv2_2156_7_62
Type: CAZyme
Location: 81559 - 84153 (-)
Gene ID: HRGMv2_2156_7_63
Type: CAZyme
Location: 84185 - 86764 (-)
Gene ID: HRGMv2_2156_7_64
Type: STP
Location: 86911 - 88656 (-)
Gene ID: HRGMv2_2156_7_65
Type: TC
Location: 88769 - 89677 (-)
Gene ID: HRGMv2_2156_7_66
Type: TC
Location: 89693 - 90643 (-)
Gene ID: HRGMv2_2156_7_67
Type: TC
Location: 90919 - 92718 (+)
Gene ID: HRGMv2_2156_7_68
Type: TF
Location: 92810 - 93637 (+)
Gene ID: HRGMv2_2156_7_69
Type:
Location: 93678 - 95300 (+)
Gene ID: HRGMv2_2156_7_70
Type: CAZyme
Location: 95471 - 96871 (+)
Gene ID: HRGMv2_2156_7_71
Type: CAZyme
Location: 96910 - 98346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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